MCA_00302_1

Browser: contigA:925178-926114-

RNA-seq: read pairs 507, FPKM 20.1, percentile rank 41.5% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1409

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   30 - 311

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 29

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   24 - 29

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   12 - 23

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 11

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 29

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   102 - 276

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_00302_1
MVFSLFNKLDTLLITFLVLSLVLAKQARADIIIIRESERQHYAKKRDGVDFGDMKLSTIVWSNIESPEATTIRRQLKQME
GDVSALATSLIEPVSSSTSTIITTTSTSSSSSSTEVISSSETISSTESISSTESISSTENVSSSESINSSEDISSSESIT
STESISSTSSDDVSTVSTSSSSEETSSAEITTSSQTVTTLTETTTDNTQQTFDSTTSDISSETTTISSSSTASLSESLES
SISSESSESSSSRSLSSTFITATTAEQSEDTTTTTTTTIASTSATNNAQTISSIKALIMGSISSIIITILL

GO term prediction