MCA_00276_1

Browser: contigA:836183-838442-

RNA-seq: read pairs 47, FPKM 0.8, percentile rank 8.3% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0043

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   752 - 752

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   24 - 729

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 23

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   16 - 23

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   5 - 15

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 4

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. TMhelix
   729 - 751

   TMHMM
   TMhelix (TMhelix)
8. TRANSMEMBRANE (Tran...)
   730 - 751

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
9. mobidb-lite (disord...)
   226 - 715

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_00276_1
MNTDTLGSSSLAISTTSSPVSSAFITSSSIPNSVNTTIQETTPLTSTSTSESFTASQISSSISQATTITSSISTVTSLPY
TKEECNSYCIYIKQHQNPVPSDEYCESLRGINDQIIINCIHCVQSFPELNAPSEPAKQLLDDLITCQIAPVFREYKDVDI
PDGSFNSTSSKPYITNSAEFTFTTISTQETSSTGIGSNIGSSFASSVVGSSKVSVITTRSNDQITSKFMETSRKEYSSPA
SSEISSGINLQTSSTSKKIPKSTSLTREISQSDQIGPEPSVTDTSKGTHISTNRDNQEETSRDSDFATTRTTDENGNILP
QSKASSSAGSTEGSEQIGPQPNPTQSDNDGGQILPQPNPTQTEDGQTLPKPNDPQSGDGSNGSDGQILPKPNGPQSGDGS
NGSDGQILPKPNDPQSGNGSNGSNGSDGSDGFNDSNDSNGSNGSNGSDGSNGSDGQILPKPNGPQFGNGSNGSNGSDGFN
GSNGSNGSNDSNGSNGSNGSNSSNGSDGSDSSNDSNDSNESNGSNGSDSSNGSDGQILPKPNDPQPENGSNGSNDGQILP
QPNESQSGSDFNDPNKGNGKVGSDQDSENGQIAPNQGTANLNDNNNNNGSNQGNNNILPGSTQQSNGDLAGTKPGQQNGQ
QGSQDNESSSFNGNNLGASNNNNNDNKVVPDDSNSSNMGGTDGSQQQQPNNNGLLRGDSVNSLMPPPALLPTAGTGDKTE
QEMLEQVNGAAVLSVSSVLSLFVFVGMTLIFV

GO term prediction