Protein
MCA_00229_1
Length
181 amino acids
Gene name: NIP7
Description: 60S ribosome subunit biogenesis protein NIP7
Browser: contigA:709395-709941-
RNA-seq: read pairs 823, FPKM 55.9, percentile rank 67.8% (100% = highest expression)
Protein function
| Annotation: | NIP7 | 60S ribosome subunit biogenesis protein NIP7 | |
|---|---|---|---|
| KEGG: | K07565 | NIP7 | 60S ribosome subunit biogenesis protein NIP7 |
| EGGNOG: | 0PFYK | NIP7 | Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (By similarity) |
| SGD closest match: | S000006132 | NIP7 | 60S ribosome subunit biogenesis protein NIP7 |
| CGD closest match: | CAL0000185986 | NIP7 | 60S ribosome subunit biogenesis protein NIP7 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01277_1 | 85.08% | 181 | 1e-120 | MIA_01277_1 |
| A0A0J9XF91_GEOCN | 79.44% | 180 | 2e-111 | 60S ribosome subunit biogenesis protein NIP7 OS=Geotrichum candidum GN=BN980_GECA13s02100g PE=3 SV=1 |
| A0A1E3PP47_9ASCO | 74.59% | 181 | 1e-103 | 60S ribosome subunit biogenesis protein NIP7 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_40379 PE=3 SV=1 |
| A0A060TBA0_BLAAD | 74.03% | 181 | 2e-102 | 60S ribosome subunit biogenesis protein NIP7 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D33484g PE=3 SV=1 |
| A0A167DBG7_9ASCO | 73.48% | 181 | 7e-101 | 60S ribosome subunit biogenesis protein NIP7 OS=Sugiyamaella lignohabitans GN=NIP7 PE=3 SV=1 |
| A0A1D8PPW6_CANAL | 71.82% | 181 | 5e-100 | 60S ribosome subunit biogenesis protein NIP7 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NIP7 PE=3 SV=1 |
| UniRef50_W1QFD1 | 70.17% | 181 | 4e-93 | 60S ribosome subunit biogenesis protein NIP7 n=78 Tax=Eukaryota TaxID=2759 RepID=W1QFD1_OGAPD |
| F2Z5Z4_YARLI | 69.61% | 181 | 5e-96 | 60S ribosome subunit biogenesis protein NIP7 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E34287g PE=3 SV=1 |
| NIP7_YEAST | 67.40% | 181 | 2e-91 | 60S ribosome subunit biogenesis protein NIP7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NIP7 PE=1 SV=1 |
| A0A1E4TI88_9ASCO | 59.44% | 180 | 3e-82 | 60S ribosome subunit biogenesis protein NIP7 OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_29878 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.3014
Predicted cleavage: 12
Protein family membership
- Ribosome biogenesis factor NIP7-like (IPR005155)
- Ribosome biogenesis factor, NIP7 (IPR016686)
Domains and repeats
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Domain
1
20
40
60
80
100
120
140
160
181
Detailed signature matches
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PF03657 (UPF0113)
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PIRSF017190 (NIP7)
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-
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SSF88697 (PUA domai...)
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no IPR
Unintegrated signatures
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SSF88802 (Pre-PUA d...)
Protein sequence
>MCA_00229_1 MRPLTEEETKVLFEKLAQYIGRNIGNLIKRSDEPYCFRVQKDRVYYVSEAVAKFATCVQRKKLMSLGTCIGKFTKTGKFR VHITALETLAPNAKFKVWIKQNGEMPFLYGNNILKAHIGKISEDVPEHTGVVVYDMHDRPLGFGVTAKSSIEIRSAPPNA IVTYRQGDVGEYLREEDTLFT
GO term prediction
Biological Process
GO:0042255 ribosome assembly
Molecular Function
GO:0003723 RNA binding
Cellular Component
GO:0005634 nucleus