Protein
MCA_00227_1
Length
806 amino acids
Gene name: RIM13
Description: Calpain-like protease palB/RIM13
Browser: contigA:704569-707054+
RNA-seq: read pairs 314, FPKM 4.8, percentile rank 17.1% (100% = highest expression)
Protein function
| Annotation: | RIM13 | Calpain-like protease palB/RIM13 | |
|---|---|---|---|
| EGGNOG: | 0PMBU | RIM13 | Required for the proteolytic cleavage of the transcription factor RIM101 in response to alkaline ambient pH |
| SGD closest match: | S000004763 | RIM13 | Calpain-like protease 1 |
| CGD closest match: | CAL0000195739 | RIM13 | Calpain-like protease palB/RIM13 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01275_1 | 54.53% | 805 | 0.0 | MIA_01275_1 |
| A0A0J9XGK7_GEOCN | 42.76% | 849 | 0.0 | Similar to Saccharomyces cerevisiae YMR154C RIM13 Calpain-like cysteine protease involved in proteolytic activation of Rim101p in response to alkaline pH OS=Geotrichum candidum GN=BN980_GECA13s02111g PE=3 SV=1 |
| UniRef50_A0A0J9XGK7 | 42.76% | 849 | 0.0 | Similar to Saccharomyces cerevisiae YMR154C RIM13 Calpain-like cysteine protease involved in proteolytic activation of Rim101p in response to alkaline pH n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XGK7_GEOCN |
| A0A060T1Q7_BLAAD | 37.25% | 800 | 3e-160 | ARAD1A02090p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A02090g PE=3 SV=1 |
| A0A1E3PRP9_9ASCO | 32.50% | 837 | 5e-133 | Cysteine proteinase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_40662 PE=3 SV=1 |
| A0A167D8Y3_9ASCO | 33.33% | 684 | 2e-113 | Rim13p OS=Sugiyamaella lignohabitans GN=RIM13 PE=3 SV=1 |
| PALB_YARLI | 30.27% | 773 | 4e-102 | Calpain-like protease palB/RIM13 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM13 PE=3 SV=1 |
| PALB_CANAL | 27.17% | 784 | 2e-58 | Calpain-like protease palB/RIM13 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RIM13 PE=3 SV=1 |
| A0A1E4TF15_9ASCO | 24.79% | 718 | 9e-44 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_105158 PE=3 SV=1 |
| RIM13_YEAST | 23.19% | 677 | 2e-14 | Calpain-like protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM13 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.6008
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
806
Detailed signature matches
-
-
SM00720 (2cal)
-
no IPR
Unintegrated signatures
-
-
-
SSF54001 (Cysteine ...)
Protein sequence
>MCA_00227_1 MVAPQNFSNLYSKALYTYSIGQKSIALDDLKSSALYLNQVLEQTSDKKLKRGLLKEVNLILNEFESLSKNKKLDLSVPEQ IQYLSSKIDSYFFYPWRGPPLLPSQDTQEIFEDPDMPLKISEFQSSIFKSWELPPIALGSDPVMGTSGAEDLSQDSLDDC SVVASLLSIYQLQKRTNKNILLKNLYPQDTTGQPVVSPCGIYCIKLFINGIERMVTIDSRLPTSNDPTHRMFVQSTTNPG LLWPAIIEKAYLKAMGGYNFRGSYSASDTYALTSWIPEYVYLNGYFEESPTSSRQSLWDKVYKNFHEGHLIACVGTGSMS IKQASSLGLIPDHDYSILDLKEIADPITGTVRNIALIKNPWMDSDNSRVASFLSLSQDNSPPCPKGSFWITFESICLRFN SLYLNWDPELFPHSKSFDFLWNTDSLKTYFDTQLLSANPQSKITNTSVHENVVWCLVNEHFSETGSINGYIALTLYDGEG KRVYASNEYAVIKSGPFLNTSQYLFKIQMPPKKSYSLVMTASEKVSKFSSMRFTLKAYSVFPVELEKAEEYPPYKQIIDD SWSLGTCGGTWTYQTYLDNPRYLLKVPEKTELFQIILCSPSKQPINMRMFMDNDIYSRNLQKKREVANSGEYRVGLTALK LTQLNPGKYTIVTSLYEPGNTGSFQLICRSSSPSFELTRLPSIDSGLYHRHSIFKWNESSRVEIPFSVHIQSLAYFHVIA LPEEETHLEHPEIMSFYRPHIRFSVFDKFTGEMLQSNNKYSDDRLGIYLDEIQLKSDNVYVLLIERMECGNGRFKVEAFS QSPVIM
GO term prediction
Biological Process
GO:0006508 proteolysis
Molecular Function
GO:0004198 calcium-dependent cysteine-type endopeptidase activity
Cellular Component
GO:0005622 intracellular