MCA_00175_1

Browser: contigA:510917-511859+

RNA-seq: read pairs 83, FPKM 3.3, percentile rank 14.2% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0811

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   19 - 313

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 18

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   15 - 18

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   3 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 24

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   60 - 173

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   284 - 313

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_00175_1
MKFSIIALSTFATLAVYAAPVAEANPNAIAEPEAIADPHFWKKKGSKFSSWFPYYRPTVPPGGSSNGGNVNSNSSANSGG
SSSSANSGGNGPVSSNSEGNTVNINLPPGSTVTNDNGHIIITEGGKGGQGSGSSSNSGSGANNANNANDNDNGNTSNSGN
NNTNGNDNSNSNQNHVNTSIYIIPGSGYLTGGAVFPGSIPFEAFLKNGTLFTQGPNNQMGQVAINNNGQLQVVNSPHEIQ
KGWLVQNGTLSPNGQNIMLCPDAAGVNYLYSGIECPQGAKVDLTTSIDPSAEQKSASSTEQKSEEHSAEQKKD

GO term prediction