Protein

MCA_00174_1

Length
602 amino acids

Gene name: GEP3

Description: Genetic interactor of prohibitins 3, mitochondrial

Browser: contigA:507950-509759+

RNA-seq: read pairs 436, FPKM 8.9, percentile rank 24.2% (100% = highest expression)

Protein function

Annotation:GEP3Genetic interactor of prohibitins 3, mitochondrial
EGGNOG:0PGR9GEP3May be involved in the mitochondrial lipid metabolism (By similarity)
SGD closest match:S000005731GEP3Genetic interactor of prohibitins 3, mitochondrial
CGD closest match:CAL0000193890GEP3Genetic interactor of prohibitins 3, mitochondrial

Protein alignments

%idAln lengthE-value
MIA_05739_138.52%5145e-116MIA_05739_1
A0A0J9XH28_GEOCN29.13%5873e-66Similar to Saccharomyces cerevisiae YOR205C GEP3 Protein required for mitochondrial ribosome small subunit biogenesis OS=Geotrichum candidum GN=BN980_GECA14s01308g PE=4 SV=1
UniRef50_A0A0J9XH2829.13%5877e-63Similar to Saccharomyces cerevisiae YOR205C GEP3 Protein required for mitochondrial ribosome small subunit biogenesis n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XH28_GEOCN
A0A1E3PDM0_9ASCO26.30%5405e-40Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_80780 PE=4 SV=1
A0A167DV76_9ASCO26.62%4322e-34Gep3p OS=Sugiyamaella lignohabitans GN=GEP3 PE=4 SV=1
A0A060T0T8_BLAAD24.52%5263e-30ARAD1C18084p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C18084g PE=4 SV=1
GEP3_CANAL24.46%4623e-23Genetic interactor of prohibitins 3, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GEP3 PE=3 SV=1
Q6C9D8_YARLI22.20%4551e-10YALI0D11990p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D11990g PE=4 SV=1
GEP3_YEAST22.43%3213e-10Genetic interactor of prohibitins 3, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GEP3 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.9988
Predicted cleavage: 39

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 602

Detailed signature matches

  1. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.40.50...
  2. mobidb-lite (disord...)

Protein sequence

>MCA_00174_1
MNTLIRQKLFTIRVFSSRVYIKNNKQCQRLFSVSSASCKAINPKHDNIKSATSVKDLIPSCQCCGSSFHHKDPSKLGFYE
APSETKRVFSSRDESLSRYNNILQNMDPESRKVLDELSGTDAVLRDNAAEEEALASVGVVAEEKKEESEDKQSSNEYQTL
DPWMYDSKIKTREQERRRNDLNSGLCVICRTIKNDNIVDISNQPHPSTEEVINMIPPEATIIHTISAHDFPASFIPSINT
YASGRKIFYVVTKSDLATDEQYKTRQRFLPYAQDLLKTKYGIDPARVFAVSGKIGWGLSDLFYKLPSDSYLVGMPNTGKT
TLAGAFGSYEVKHSTPKVITQLKQRKVGQTTIPCMTKHPIKYFNLQKKLTDLPSIEIDPICKTFSHIQKNHLRKVAQGIV
AIKRFGLPATQRKVLPNNGSVLSLGGLVFIEFEKNEIDKRLVLISWPIIGEALTAAHVFTTIEKAITVTNKPINLQQESW
VYINPVETESEENVQDQNENPDSHVTEHNKTETGKVEKIMDFPLTSAGAEIGILGIGSVALKLNGPIPESGVKANIYARP
GVKVVLRDTPLLDTLRDFKPSSNRKRDNNKSPRKTNNKKGNK

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.