Protein
MCA_00118_1
Length
219 amino acids
Gene name: VPS60
Description: Vacuolar protein-sorting-associated protein 60; involved in late endosome to vacuole transport
Browser: contigA:324460-325185+
RNA-seq: read pairs 1521, FPKM 85.4, percentile rank 76.3% (100% = highest expression)
Protein function
| Annotation: | VPS60 | Vacuolar protein-sorting-associated protein 60; involved in late endosome to vacuole transport | |
|---|---|---|---|
| KEGG: | K12198 | CHMP5 | charged multivesicular body protein 5 |
| EGGNOG: | 0PKYZ | FG10503.1 | charged multivesicular body protein 5 |
| SGD closest match: | S000002894 | VPS60 | Vacuolar protein-sorting-associated protein 60 |
| CGD closest match: | CAL0000196055 | CTA1 | Cta1p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04117_1 | 81.70% | 224 | 8e-111 | MIA_04117_1 |
| A0A0J9XDB0_GEOCN | 76.74% | 215 | 6e-97 | Similar to Saccharomyces cerevisiae YDR486C VPS60 Cytoplasmic and vacuolar membrane protein involved in late endosome to vacuole transport OS=Geotrichum candidum GN=BN980_GECA10s02177g PE=3 SV=1 |
| A0A060T2I0_BLAAD | 73.36% | 214 | 1e-96 | ARAD1C32186p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C32186g PE=3 SV=1 |
| A0A167END6_9ASCO | 70.56% | 214 | 1e-96 | Vps60p OS=Sugiyamaella lignohabitans GN=VPS60 PE=3 SV=1 |
| Q6CF98_YARLI | 69.95% | 213 | 2e-87 | YALI0B08987p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B08987g PE=3 SV=1 |
| A0A1E3PHX8_9ASCO | 73.02% | 215 | 2e-83 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52189 PE=3 SV=1 |
| UniRef50_A3LV46 | 67.13% | 216 | 5e-78 | Protein involved in vacuolar protein sorting n=26 Tax=Fungi TaxID=4751 RepID=A3LV46_PICST |
| Q5A4P1_CANAL | 66.51% | 215 | 8e-79 | Cta1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CTA1 PE=3 SV=1 |
| A0A1E4TEH9_9ASCO | 63.55% | 214 | 2e-78 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1888 PE=3 SV=1 |
| VPS60_YEAST | 38.10% | 231 | 4e-38 | Vacuolar protein-sorting-associated protein 60 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS60 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.7285
Predicted cleavage: 13
Protein family membership
- Snf7 family (IPR005024)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF03357 (Snf7)
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_00118_1 MNRLFGTKSTAPKPTLTDAVNNIDGRVATLDVKLQKLNAELSIYQQKLGRMRDGPGKNSLRAKALKVLKQRKQIEAQKDA LEAQSWNMEQASIQTDNLRNVMTTVDAMKTANKELKKQYGKINIDKIESLQDEMADLMDMSQELQETMARNYAVPDDISE SELDAELEALGEEMEFESAQSEATGLPSYLADSSAMPSFIDEPVEPSKETEAAQKEVAS
GO term prediction
Biological Process
GO:0007034 vacuolar transport
Molecular Function
None predicted.
Cellular Component
None predicted.