Protein
MCA_00111_1
Length
751 amino acids
Gene name: NUP82
Description: Nucleoporin NUP82
Browser: contigA:296599-299179+
RNA-seq: read pairs 2629, FPKM 43.2, percentile rank 62.2% (100% = highest expression)
Protein function
| Annotation: | NUP82 | Nucleoporin NUP82 | |
|---|---|---|---|
| KEGG: | K18719 | NUP82 | nucleoporin NUP82 |
| EGGNOG: | 0PISX | FGSG_05487 | conserved hypothetical protein |
| SGD closest match: | S000003597 | NUP82 | Nucleoporin NUP82 |
| CGD closest match: | CAL0000183573 | NUP82 | Linker nucleoporin |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04169_1 | 41.43% | 770 | 0.0 | MIA_04169_1 |
| A0A060SWS9_BLAAD | 32.80% | 744 | 6e-107 | ARAD1A03234p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A03234g PE=4 SV=1 |
| UniRef50_A0A060SWS9 | 32.80% | 744 | 1e-103 | ARAD1A03234p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060SWS9_BLAAD |
| A0A1E3PJ39_9ASCO | 30.12% | 767 | 1e-81 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_46706 PE=4 SV=1 |
| A0A161HG49_9ASCO | 28.08% | 787 | 5e-80 | Nucleoporin nup82 OS=Sugiyamaella lignohabitans GN=AWJ20_1270 PE=4 SV=1 |
| A0A0J9XCY4_GEOCN | 29.44% | 625 | 1e-68 | Similar to Saccharomyces cerevisiae YJL061W NUP82 Nucleoporin subunit of the nuclear pore complex (NPC) OS=Geotrichum candidum GN=BN980_GECA10s00637g PE=4 SV=1 |
| NUP82_YEAST | 20.90% | 622 | 2e-26 | Nucleoporin NUP82 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP82 PE=1 SV=2 |
| Q6CI34_YARLI | 25.91% | 328 | 7e-22 | YALI0A02134p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A02134g PE=4 SV=1 |
| A0A1D8PQA2_CANAL | 28.45% | 341 | 1e-21 | Linker nucleoporin OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NUP82 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0947
Predicted cleavage: 19
Protein family membership
- Nucleoporin Nup88 (IPR019321)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF10168 (Nup88)
-
no IPR
Unintegrated signatures
Protein sequence
>MCA_00111_1 MKIPSFDQFIANHKIFRNGVPYNYEETPVRNRLLVRANEVFYAVGKEIRCGNLTDSLSYKTLEIPILSFEISSIVMNTAG SLLAIVGTNRIIVCDLPAKGFMKSTKTTIQVRCRDLSPESFEIGAVLKVLWNPIHRYDANLIVLDSQNIIRSFDLINSYK TPDQTIDLNSHSVHPQLSEFEAFSACSIALGTKSDPHGPFTLYVLSRDGDMYALCPFVPSTFVLTQNQLEELFDLAVAEE HEYRHSEGSELIVRKHYKRQLDWAADIWKQASLTVVETRLSEDGLKFEEFFVLQRPSTYLNPQLQGPFSFEPYPDEFYNY DAVDVETVDNGACAVILTTYSNGSILIALQVHSIDLNWAVLDASVDLTLFVIESILPAEAASYPNNYFRPGIFVPPESKN TVYILNSRFIHRINMDAWCSQIKAALDEGVLEDVETIVHNSPSSEVTTLLQVRDETYFGGVAEVKALVKSIIIATNDHVW LEVINEGIIPELLAKKPLDRRDSNLSEITKKRERTYLDDPFNIDQAFKRLTLNNRQFPLPPRDISVNSPIVPDDSMLKYF DQVGEFFSAQAAQLHSIGYLMYNRLQAQRNELHRQVTKLDECYKNIIEPLKDKVSRKERLAEIISRQQKLEERLHLLHTR VSSASSNPRSMEERKWKEELERLEKSISGTRGLESRVQNAFSQAKVLLDEKKFKMNQQKNGSIEQPTDVQKYDNENIAMV KRMAIKETQTINKVKELLTELSTDVSNELKV
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.