Protein
MCA_00107_1
Length
1,031 amino acids
Gene name: PET309
Description: Pentatricopeptide repeat-containing protein PET309, mitochondrial
Browser: contigA:284363-287459-
RNA-seq: read pairs 1065, FPKM 12.8, percentile rank 30.5% (100% = highest expression)
Protein function
| Annotation: | PET309 | Pentatricopeptide repeat-containing protein PET309, mitochondrial | |
|---|---|---|---|
| EGGNOG: | 0PHB5 | Inherit from KOG: Pentatricopeptide repeat-containing protein | |
| SGD closest match: | S000004057 | PET309 | Pentatricopeptide repeat-containing protein PET309, mitochondrial |
| CGD closest match: | CAL0000201653 | orf19.4929 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04166_1 | 35.55% | 872 | 0.0 | MIA_04166_1 |
| A0A0J9X9M8_GEOCN | 34.13% | 841 | 6e-170 | Similar to Saccharomyces cerevisiae YLR067C PET309 Specific translational activator for the COX1 mRNA,also influences stability of intron-containing COX1 primary transcripts OS=Geotrichum candidum GN=BN980_GECA06s00945g PE=4 SV=1 |
| UniRef50_A0A0J9X9M8 | 34.13% | 841 | 1e-166 | Similar to Saccharomyces cerevisiae YLR067C PET309 Specific translational activator for the COX1 mRNA,also influences stability of intron-containing COX1 primary transcripts n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9M8_GEOCN |
| A0A167ESW1_9ASCO | 26.38% | 743 | 4e-79 | Pet309p OS=Sugiyamaella lignohabitans GN=PET309 PE=4 SV=1 |
| A0A060SW87_BLAAD | 26.46% | 873 | 2e-71 | ARAD1A02838p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A02838g PE=4 SV=1 |
| PT309_YEAST | 21.91% | 648 | 6e-39 | Pentatricopeptide repeat-containing protein PET309, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PET309 PE=1 SV=1 |
| A0A1E3PCP0_9ASCO | 20.31% | 448 | 9e-18 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_44115 PE=4 SV=1 |
| A0A1E4TLG5_9ASCO | 22.04% | 304 | 7e-14 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30632 PE=4 SV=1 |
| A0A1D8PFL0_CANAL | 28.05% | 82 | 2e-06 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4929 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.3209
Predicted cleavage: 17
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
100
200
300
400
500
600
700
800
900
1031
Detailed signature matches
no IPR
Unintegrated signatures
Protein sequence
>MCA_00107_1 MSSRQLVHHSKLSGRSESLIWCLNNFTSDFLSEHIYLENKQVHSRYKRLLQHFPFQLKSWIDSKPLISSNLLSMPALLSS SSSALSPSISSSSSALYVQAPPHNNQCKQFIPIVNTSFQKAFYVTKSYTSLTTPKSPFDTSLAQISRILKLKKLKSTDVK DFFNALDKIISLSSTEGISPKFLEIRKDVYKKLISLTAPERFEYILKIFNLIPTQKIARYDFGANIVATSRLDFKNIENV LFESMKYLSNSSVLDLLYSSVTLIFGLAKKDGDLYSTTQKCLVIFYSIILKQLGTLRLLDYSLYESERDILSYIMDQSNS DIIVQILGKMMDHNPRFSQMLATTILDLYYKKRQYEDVVKIWTLKEKQGFASPFDLLRVMKSYSELQLPELAIQAYEKHT DIQAYWHFDVLLRSYAQNQDWVGMRHTFDSLFGRGDLPNIEHYRIVMESIAKIADIDTIQFLYQNLTARHMEPNVHIFNA IMYAQYAYGNVTGVREAFEALEAAGIKPNSRTFDILLMVYRDARDVESAISVMRMMYERSLPIHRSYITTLLSLCARRKD DVQADLIFGWFKQLGIEPDLIAYNALLYCYTQAYKPIKVRDLCEEMREKKLEFGIDTLTVLLEHYSGLKRESSVRSILDQ IVKRGMRPDYKFYAVLLDHFSKNHEMEKAESVINYLKAETKGPTVFHYTILMKGYLYDNNYEKVIEIYNSLEDNGIKPTY HMMAVITTAMRGMGIESGRLDLTQESLNLVNNLLENPDTFDITSNHIPRNIPPPDVATALIQDSLGDPSKESVESIIQRM RDPNIMMNNLYSLRNILLDFGYRNEWDKFDQYWDLFMELQRKQYVKRRSKGSDEYVDKIPKADRMINDEIFRLKIRYLSI YNSFDIIIPFVQEMEEEGYKMSNELLNDVVQLLLPYEETVESAYEFVEARLMKYQYKRLLLNQMYERNQISEEQVIKELG SYRISQETINALKEAFPNLLKIISVQENISLNKALLRAYMRMPETIKYVYRLEYNSRFNSGVIEKLMTESL
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.