Protein

MCA_00070_1

Length
1,218 amino acids

Description: protein with zinc finger SWIM-type domain

Browser: contigA:175858-179568-

RNA-seq: read pairs 1833, FPKM 18.6, percentile rank 39.5% (100% = highest expression)

Protein function

Annotation:protein with zinc finger SWIM-type domain

Protein alignments

%idAln lengthE-value
MIA_04131_136.12%11490.0MIA_04131_1
A0A0J9YHD5_GEOCN28.14%4695e-44Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA01s02749g PE=4 SV=1
UniRef50_A0A0J9YHD528.14%4691e-40Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9YHD5_GEOCN

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2476

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 200 400 600 800 1000 1218

Detailed signature matches

  1. Domain IPR007527
    Zinc finger, SWIM-type
    1. PS50966 (ZF_SWIM)
    2. PF04434 (SWIM)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_00070_1
MTSSSRRKTVVKKSDSRVQPATREPSQQRQQEQRQQTLQTRETKKPLKLEPDTQSAYYYYVYVQSEEKAVILYNNNKDSG
DIAPLPQNVLEASEPLNNILMKYILAKQLLQFLDQKNYLEKVDDTIKYPQVVKIEEPSLLRNFLPQKRSRIVPTFPKPSA
FLSKISNTLPTYAPPLSHSPNDLIERLKKIEIELGSTFLCFEEARLCILIYCQMVAQRPLRFSHSEIQRECYSVGCYKSD
CPFEISVRPFDSTLPLQYAPLLVVNRFAKHTCEPYTAVYQTNKKRDATFYQSTVQKPLMYPKCLPILFDYIRPREKNLSP
SDFVEYYNALEELFKVNQNHHLPRISTSKMLSQIDFAESFVMDMLNPLKDNNLPPMHVAAIYLKIHSPESNIRISYKDTK
RNIFLHAPPHQAELKSKDLHIKVNNDVMNRLAFSIAAPDKNLRILEPFQASPDEVDGSIMPNEIEFLWDKEFQIDEGWEL
INLKHFLPEFPRISKYSFEPHPKKDIKPPTSFKDIEQAMLNQEHQKVNEVPMSQTLDDFIKDSNSENQNIRLNPIFLDFD
EEMVDVNTEESADENNIKLDSDDEIGDDETVGSVNFEEDNDNDDFDIDLEPSFESSDTQFLPQSTQEKLSVLSMLLNISN
PEQRLKEIALSTELFSVSSYNPDMFTMNSCDTPNTSWTDIKQESVEKKTPSTYCDLVHCSQPRDGNIPGYCNTHAKQDRE
AQLYRTMVQSRTFFDPYVMGQVIEDFYPLVYMYTDASFERMTVITADMKRMAQSAIPLVEIGSIHRSLKRQTGHHHIIFA
VGNTPEQNITILGYCISTSLDLRTYLEFFAELSLAYGELFQDRKFAFISSYDPTISVALNCVFPQRKHCISLHSIANLIS
KDDTNSKENEFIGVITQPNLTSFREHCQSLFPKYSSTLIESPGCWTLGMSTVARFGRNNSTNISVISKLLDPYITSARLP
LTINNLQSTIVDQQKRKIEEGHFIKFKNDTKYFALAASRLLAHATLFIDLFDVIHIEGSTKYYVRAKANSPLVLLKHNTS
AIPMLLDALYFDKGCPGPIRRKRVQTTQTHDSYKVDLETRSCSCSFYQDLQLPCIHALACIIKFHDGKVSSFCNEIYHLD
NYKNTLDSCELLNLNPTVADLQYINICLTKLKLHQLSPVSDPNSSAYNSSNNGNQIRYYNTDVFNTYYPNSTNPEFRPTT
NTLNDYYYIHQYLDNPET

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0008270 zinc ion binding

Cellular Component

None predicted.