Protein

MCA_00042_1

Length
629 amino acids

Browser: contigA:102242-104214-

RNA-seq: read pairs 527, FPKM 10.3, percentile rank 26.4% (100% = highest expression)

Protein function

CGD closest match:CAL0000180552orf19.5429DNA-binding SCF ubiquitin ligase subunit

Protein alignments

%idAln lengthE-value
A0A0J9XFP7_GEOCN27.61%6233e-53Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA14s01242g PE=4 SV=1
UniRef50_A0A0J9XFP727.61%6236e-50Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XFP7_GEOCN
MIA_04045_129.80%3492e-40MIA_04045_1
A0A060T4D4_BLAAD25.31%5696e-16ARAD1C03564p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C03564g PE=4 SV=1
Q5A7N7_CANAL28.22%1632e-08DNA-binding SCF ubiquitin ligase subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5429 PE=4 SV=1
A0A167DF03_9ASCO30.41%1483e-07Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_1115 PE=4 SV=1
A0A1E3PSJ1_9ASCO26.42%1933e-07Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_76193 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2524

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 629

Detailed signature matches

  1. Domain IPR011990
    Tetratricopeptide-like helical domain
    1. G3DSA:1.25.40.10
    2. SSF48452 (TPR-like)
  2. Domain IPR013026
    Tetratricopeptide repeat-containing domain
    1. PS50293 (TPR_REGION)
  3. Domain IPR001810
    F-box domain
    1. PF00646 (F-box)
    2. SSF81383 (F-box domain)
  4. Domain IPR032675
    Leucine-rich repeat domain, L domain-like
    1. G3DSA:3.80.10.10
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:1.10.15...
  3. G3DSA:1.20.12...
  4. SSF52047 (RNI-like)

Protein sequence

>MCA_00042_1
MDPLKSRLQDGLKQARSQYMKNDLRRAISILDKLEGLYINFEKLHDTSDEELVEIIYQIYDRRGLCFRKLQNYKSALKDA
NSMIEIQKSNPKGYLVKGKLQEAMGIRSRAINTYSKGLAESLDGQSLLYRQLKVALESALQKVNSSNTIVKKRSNVTDPI
FVLPYSDIFHHILFLLDFKTIIRCTQVSKTWRRMIITDTKLYGEKLDLTLRYQKPRNYITGWDKPELTKILNTASGSRQR
AIRNVDLSVISKKREYEIIKMVFKEFGHCITNLTIKLVTNALFDIFLENFDNNIPCCAGIESLTVTAPLPPFLIPFLINN
SPKLKSLNAISTEFIETNWYNHKLRKLLTKKNTTIQKFFEKTPSGMLLEEVQIDNSSTPPNGMERELLKYVETNFYKTLK
KISLAFQKKNDQTGPLLHIPGIVNKMDCLEHLSIRGAILDQVPSVLIKPLKTLSLSDSKVRSVVLDSQESPPLLSMEELR
LFHCSIPMRDGRYFSKMIQDFGCGEKLKCLFLEYLRLPFLYDEDGYHQFIRMKFPNLEQLSFGGNSEVNDVTACAIVAQN
PFPKTVILSHTSTTFHGFCKLFRAGVQYVGLQRCDLSIMELQDLERLGLATKLIESKIYTRRTLDPRIA

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.