Protein
MCA_00039_1
Length
495 amino acids
Browser: contigA:96093-97790+
RNA-seq: read pairs 133, FPKM 3.3, percentile rank 14.4% (100% = highest expression)
Protein function
| SGD closest match: | S000005483 | HRP1 | Nuclear polyadenylated RNA-binding protein 4 |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04041_1 | 52.07% | 507 | 2e-154 | MIA_04041_1 |
| A0A0J9XGN2_GEOCN | 29.25% | 147 | 4e-14 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA16s01858g PE=4 SV=1 |
| UniRef50_A0A0J9XGN2 | 29.25% | 147 | 9e-11 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XGN2_GEOCN |
| A0A060TBG3_BLAAD | 25.97% | 181 | 5e-11 | ARAD1D31548p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D31548g PE=4 SV=1 |
| A0A1E4TFP8_9ASCO | 31.30% | 131 | 7e-10 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_26233 PE=4 SV=1 |
| HRP1_YEAST | 25.00% | 164 | 1e-08 | Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRP1 PE=1 SV=1 |
| Q6CHY5_YARLI | 24.74% | 194 | 1e-07 | YALI0A03509p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A03509g PE=4 SV=1 |
| A0A167FJ90_9ASCO | 24.14% | 174 | 5e-06 | Nop4p OS=Sugiyamaella lignohabitans GN=NOP4 PE=4 SV=1 |
| A0A1E3PEN7_9ASCO | 33.33% | 72 | 7e-06 | Splicing factor, CC1-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48217 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1979
Predicted cleavage: 13
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
495
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd00590 (RRM_SF)
-
mobidb-lite (disord...)
Protein sequence
>MCA_00039_1 MVRQISNENELPSSIWKKDDSNWTVVQPKKKKPLNPSFKDTKNLTGLDRSETPLTKIKVLDKKTTSFTNKSEINKNYGKP TTANNNEFPSLSQNPTKSAPVMKTSLWAQKVASKQSSSIGNSRGERPTKPMHVIRREKPVIEDKKEPQIAHSKPSTEEES KDKFVEPRFVYDINCVVFVGNVASTTTQDMLSRFFSQFGLVKSVNLKNAVTGRNRRDYAFIKFLTPDSVTKVLNSKEPLV LDGATLEVRPRAGSTSTSTLPKTANKNTQMTVDNGFKTILVENIPESWSPQFFFQCFCSYGKPISCFVYDGVDNKGTKQG LIEMETSAAASSLCKNTGYLLLPNNTTVKVTLTSIPNFSEWVKMHTQWLIYHQMANMKYNLPQMAYKNPLVPKSEVSNST EKKEKNDVSVEKPRAISSIVKASNVDIKSFKNSDEVFTTFRNIFGHAYTPAIVSISSEGKAIVIFKVPDLNEAKNANKVF DWTTFPGSVPEIAFT
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.