Protein
MCA_00036_1
Length
877 amino acids
Gene name: STO1
Description: large subunit of the nuclear mRNA cap-binding protein complex
Browser: contigA:84996-87757-
RNA-seq: read pairs 3541, FPKM 49.8, percentile rank 65.3% (100% = highest expression)
Protein function
| Annotation: | STO1 | large subunit of the nuclear mRNA cap-binding protein complex | |
|---|---|---|---|
| KEGG: | K12882 | NCBP1 | nuclear cap-binding protein subunit 1 |
| EGGNOG: | 0PGW2 | FG07328.1 | Cap binding protein |
| SGD closest match: | S000004732 | STO1 | Nuclear cap-binding protein complex subunit 1 |
| CGD closest match: | CAL0000190077 | GCR3 | Gcr3p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04089_1 | 41.33% | 830 | 8e-180 | MIA_04089_1 |
| A0A0J9XFY8_GEOCN | 46.27% | 670 | 0.0 | Similar to Saccharomyces cerevisiae YMR125W STO1 Large subunit of the nuclear mRNA cap-binding protein complex OS=Geotrichum candidum GN=BN980_GECA14s02144g PE=4 SV=1 |
| UniRef50_A0A0J9XFY8 | 46.27% | 670 | 8e-178 | Similar to Saccharomyces cerevisiae YMR125W STO1 Large subunit of the nuclear mRNA cap-binding protein complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XFY8_GEOCN |
| A0A1E3PI47_9ASCO | 38.84% | 739 | 3e-145 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47202 PE=4 SV=1 |
| A0A170QZN0_9ASCO | 36.92% | 688 | 3e-124 | Sto1p OS=Sugiyamaella lignohabitans GN=STO1 PE=4 SV=1 |
| A0A060TEJ9_BLAAD | 32.82% | 783 | 1e-114 | ARAD1D08250p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D08250g PE=4 SV=1 |
| Q6CH33_YARLI | 35.13% | 706 | 2e-113 | YALI0A13101p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A13101g PE=4 SV=1 |
| A0A1D8PEB4_CANAL | 34.17% | 559 | 2e-70 | Gcr3p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GCR3 PE=4 SV=1 |
| A0A1E4TEV2_9ASCO | 26.09% | 686 | 5e-63 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2032 PE=4 SV=1 |
| NCBP1_YEAST | 29.81% | 567 | 1e-57 | Nuclear cap-binding protein complex subunit 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STO1 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0035
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
700
800
877
Detailed signature matches
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
-
-
NON_CYTOPLASM... (N...)
-
TRANSMEMBRANE (Tran...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_00036_1 MYDNKQYNRKRRRDDGGYEKSSKPRREVPPIFVVRRNIVELGESVRFPLSSSVSHLARGITDLTEENRLPMLDTVQATIY EQPHKTPLIAGAIQISNSINSSIGKITIESFHNRLQEAINEGNFGLVKAITRLICCLFPIIEGDGDDNGAFKLLNCQLDR AIELQQSLGSKRSPLAEDLFISVALSLPFIPSTVILTHISDDTKESITKLIVKLREFYELHRKVENEYSLDIISPFTGDK QPYSATTFISHINSAIDQFEAGNFETRTLIDLPRLIELGLPEGSPPIKHPFPAVNFPEIDNLPEYKDEMYLTPRLFFSVY LPEKFSVVPPPGTYESLLFRDISCDIINHMDFNRNEVTRQLCTLDLFFAKTAFAEPTISMEELERLYESSPSTSTWKVEN VAFEAILEELMRLPKNLFHPAYFHSIIIEACRVAPRIVAPAVGRAIRFLYNNIESLDFELQQRTLDWFSHHLSNYGFSWK WGEWTEGISLPEMHPKRVFIQQLILKELRLSTPDRILPTLPPEYAQFVPSFSKNPECKWFSPELQFQEEAEKFLSLMSSE KSEIEELLKEIREKANEIAADRGSESFDPTSTLVDLVVTVTCFASNRSLSHAELSVNQIKEILIDVCSLDPTTAIESIFD YWSGQPHVALLVTTVFIKYGVISPKSFIQTIFDYTKSEEEKSVLLLKAKQDGITDIDYKAASTKGIWPHWELLTTTHGWE MMLRLIEVSFSEESPLASSERDELLIEILTQLQQLIYQIESDVSDMEGIAKKSRDEAIERAAEAKMNEGGDEVVEEGDEE NNEEIRKSMADEVPKTKEEIDWENKKWALWWVQGFSKSLIRHYSEYFKTSEVVQSLPKSITDNEKSYVGKILEQINF
GO term prediction
Biological Process
GO:0016070 RNA metabolic process
Molecular Function
GO:0005488 binding
Cellular Component
None predicted.