Protein
MCA_00031_1
Length
468 amino acids
Gene name: CDC43
Description: geranylgeranyl transferase type-1, subunit beta
Browser: contigA:78871-80278-
RNA-seq: read pairs 1236, FPKM 32.6, percentile rank 55.0% (100% = highest expression)
Protein function
| Annotation: | CDC43 | geranylgeranyl transferase type-1, subunit beta | |
|---|---|---|---|
| KEGG: | K11713 | PGTB1 | geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] |
| EGGNOG: | 0PK7U | FG05766.1 | Beta subunit |
| SGD closest match: | S000003123 | CDC43 | Geranylgeranyl transferase type-1 subunit beta |
| CGD closest match: | CAL0000180354 | CDC43 | Protein geranylgeranyltransferase type I subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04095_1 | 39.52% | 463 | 1e-104 | MIA_04095_1 |
| A0A0J9XHS5_GEOCN | 37.72% | 456 | 2e-89 | Similar to Saccharomyces cerevisiae YGL155W CDC43 Beta subunit of geranylgeranyltransferase type I OS=Geotrichum candidum GN=BN980_GECA17s01451g PE=4 SV=1 |
| UniRef50_A0A0J9XHS5 | 37.72% | 456 | 5e-86 | Similar to Saccharomyces cerevisiae YGL155W CDC43 Beta subunit of geranylgeranyltransferase type I n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XHS5_GEOCN |
| Q6C6I4_YARLI | 32.60% | 457 | 6e-58 | YALI0E09276p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E09276g PE=4 SV=1 |
| A0A167CRH3_9ASCO | 31.77% | 447 | 3e-56 | Protein geranylgeranyltransferase type I subunit CDC43 OS=Sugiyamaella lignohabitans GN=CDC43 PE=4 SV=1 |
| A0A1E3PEE7_9ASCO | 30.95% | 420 | 2e-47 | Terpenoid cyclases/Protein prenyltransferase (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13256 PE=4 SV=1 |
| A0A1D8PSW8_CANAL | 28.35% | 455 | 2e-44 | Protein geranylgeranyltransferase type I subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CDC43 PE=4 SV=1 |
| A0A060TB48_BLAAD | 26.89% | 424 | 3e-40 | ARAD1B05456p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B05456g PE=4 SV=1 |
| PGTB1_YEAST | 25.52% | 435 | 1e-22 | Geranylgeranyl transferase type-1 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC43 PE=1 SV=2 |
| A0A1E4TD94_9ASCO | 24.09% | 411 | 6e-21 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_4248 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0335
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
50
100
150
200
250
300
350
400
468
Detailed signature matches
no IPR
Unintegrated signatures
Protein sequence
>MCA_00031_1 METQNNTFNKELHTKYFIRCLGILPPSAVIYDSSRLSLVYFCLSALDILGTLETATTETQRTQWADWIYSNIVNSKEGFR ASPTHAIPSELYTNASNKDTTTAIETYDCASLSATYFALTSLAILKDKRITKLVDSEKVANYIGKCQRKQGCESKPYAKR ENIKLEMGSFSPTYSSITQQPFGEFDPRCNYMALSTLFILNKLPAISTGSLKDLKVSSSSKQENEIDLKSVISFILSSKS YEGGLGMFAGTESHTGYTYCGLSSIRILLSHNIHISDENEIKEFLQRTFNVFDWTQTIRWLSRRQIGPILETYRTDLKRY NYRQSDNSAYSDEPEPAHIKSFHKWEEEEIGAFNGRTNKQGDTCYSFWSTASLMVLYSLISGSDNEKSLPINVESAENFL LNHAQSKLTGGFGREKGYHPDHYHSYLAVTSLSILDSKTKHNYGLKDVVPEFCLTKETVEWIKTLEWD
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003824 catalytic activity
Cellular Component
None predicted.